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View Structure Prediction Details

Protein: Y1661_ARATH
Organism: Arabidopsis thaliana
Length: 842 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for Y1661_ARATH.

Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFNRNLTL VTTLLIFHQL CSNVSCSTSN SFTRNHTIRE GDSLISEDES FELGFFTPKN  60
   61 STLRYVGIWY KNIEPQTVVW VANREKPLLD HKGALKIADD GNLVIVNGQN ETIWSTNVEP 120
  121 ESNNTVAVLF KTGDLVLCSD SDRRKWYWES FNNPTDTFLP GMRVRVNPSL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.09691
Match: 1kj1D
Description: Lectin (agglutinin)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [171-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GENRAFIPWK SESDPSPGKY SMGIDPVGAL EIVIWEGEKR KWRSGPWNSA IFTGIPDMLR  60
   61 FTNYIYGFKL SSPPDRDGSV YFTYVASDSS DFLRFWIRPD GVEEQFRWNK DIRNWNLLQW 120
  121 KPSTECEKYN RCGNYSVCDD SKEFDSGKCS CIDGFEPVHQ DQWNNRDFSG GCQRRVPLNC 180
  181 NQSLVAGQED GFTVLKGIKV PDFGSVVLHN NSETCKDVCA RDCSCKAYAL VVGIGCMIWT 240
  241 RDLIDMEHFE RGGNSINIRL AGSKLGGGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.045757
Match: 1m6bA
Description: Receptor protein-tyrosine kinase Erbb-3 extracellular domain; Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [440-842]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENSTLWIIVF SVIGAFLLGL CIWILWKFKK SLKAFLWKKK DITVSDIIEN RDYSSSPIKV  60
   61 LVGDQVDTPD LPIFSFDSVA SATGDFAEEN KLGQGGFGTV YKGNFSEGRE IAVKRLSGKS 120
  121 KQGLEEFKNE ILLIAKLQHR NLVRLLGCCI EDNEKMLLYE YMPNKSLDRF LFDESKQGSL 180
  181 DWRKRWEVIG GIARGLLYLH RDSRLKIIHR DLKASNILLD TEMNPKISDF GMARIFNYRQ 240
  241 DHANTIRVVG TYGYMAPEYA MEGIFSEKSD VYSFGVLILE IVSGRKNVSF RGTDHGSLIG 300
  301 YAWHLWSQGK TKEMIDPIVK DTRDVTEAMR CIHVGMLCTQ DSVIHRPNMG SVLLMLESQT 360
  361 SQLPPPRQPT FHSFLNSGDI ELNFDGHDVA SVNDVTFTTI VGR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.39794
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle