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View Structure Prediction Details

Protein: gi|30682979, gi|...
Organism: Arabidopsis thaliana
Length: 623 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30682979, gi|....

Description E-value Query
Range
Subject
Range
gi|222615549, gi... - gi|222615549|gb|EEE51681.1| hypothetical protein OsJ_33035 [Oryza sativa Japonica Group], gi|2156947...
gi|218185284 - gi|218185284|gb|EEC67711.1| hypothetical protein OsI_35189 [Oryza sativa Indica Group]
584.0 [0..2] [621..62]

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Predicted Domain #1
Region A:
Residues: [1-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPPENSLDS DGSNLETAER IILRWDSAAT DGARGKMIFQ SDRDEVDRFL RAVDEIQRSL  60
   61 SSVSFSSSSS SAATSAATVV DEHEVKANSA IQIAMARLED EFRNILLSHT TTFEPDSLFL 120
  121 EEPSVSPSLT VEVGEDTTVT PEEEELNSPG GSGSSRLTRR RSSYRSTSSI REMDLISPEA 180
  181 VSDLRSIVQR MVAAGYSREC IQVYGTVRKS AMEAIFKQLG IVKISIGDVQ RLEWEVVEGK 240
  241 IRKWIRAAKV CIRVVFSSEK RLCEQLFDGI CTAMDETCFM ETVKASALRL FTFPEAISIS 300
  301 RRSPEKLFKI LDLHDALTDM LPDIEAIFDS DSSDAIRAQA VEIQSRLAEA ARGILSEFEN 360
  361 AVLREPSIVP VPGGTIHPLT RYVMNYIVMI SDYKQTLDDL IMSNPSTGSD PNTPDMDFTE 420
  421 LDSKSPLDLH LIWLIVVLHF NLEEKSKHYR DTSLAHIFIM NNIHYIVQKV KRSPELREMI 480
  481 GDHYLRKLTG IFRHAATNYQ RATWVRVLNS LRDEGLHVSG SFSSGVSRSA LRERFKAFNT 540
  541 MFEEVHRTQS TWSVPDAQLR EELRISLSEH LIPAYRSFLG RFRGHIESGR HPENYLKYSV 600
  601 EDIETIVLDF FEGYTTPPHL RRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 114.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle