YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PHT21_ARATH
Organism: Arabidopsis thaliana
Length: 587 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHT21_ARATH.

Description E-value Query
Range
Subject
Range
gi|30688378 - gi|30688378|ref|NP_189289.2| PHT2;1 (PHOSPHATE TRANSPORTER 2;1); low affinity phosphate transmembran...
486.0 [0..1] [587..27]

Back

Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLPYRFSSV RNHSLLLKTS HLCTPRSALG CCFSPKESPF FRKNTAQFLS PQKHTSLPLK  60
   61 LVCPLASFSS YADSEGEEQH HADQPIQNPH ESSTVSNESD GKGNAEATGD FSGMAQAFHI 120
  121 SSTTARAISI VIAFSALTLP IFMKSLGQG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.975
Match: 2cqeA
Description: Solution Structure of the Zinc-finger domain in KIAA1064 protein
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [150-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LALKTKLLSY ATLLFGFYMA WNIGANDVAN AMGTSVGSGA LTIRQAVMTA AVLEFSGALL  60
   61 MGTHVTSTMQ KGILMANVFQ GKDMLLFAGL LSSLAAAGTW LQVASYYGWP VSTTHCIVGS 120
  121 MVGFGLVYGG AGAVFWSSLA KVASSWVISP ILGALVSFLV YKCIRRFVYS APNPGQAAAA 180
  181 AAPVAVFVGV ASISSAALPL SK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [352-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IFPIALSQAL ACGVAGAIVF DRIIRKQLGH LLAKTKSPET SQNQPKTIGF LSDIAGPTGT  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [412-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLEIVYGIFG YMQVLSACFM SFAHGGNDVS NAIGPLAAAL SILQNGAAAG GAEIVIPMDV  60
   61 LAWGGFGIVA GLTMWGYRVI ATIGKKITEL TPTRGFAAEF AAASVVLFAS KLGLPISATH 120
  121 TLVGAVMGVG FARGLNSVRA ETVREIVASW LVTIPVGATL AVIYTWIFTK ILSFVL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle