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View Structure Prediction Details

Protein: GUX1_ARATH
Organism: Arabidopsis thaliana
Length: 659 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GUX1_ARATH.

Description E-value Query
Range
Subject
Range
gi|23297040, gi|... - gi|23297040|gb|AAN13228.1| unknown protein [Arabidopsis thaliana], gi|18401961|ref|NP_566615.1| PGSI...
679.0 [0..1] [659..1]
gi|56784626, gi|... - gi|56784626|dbj|BAD81673.1| glycogenin-like protein [Oryza sativa Japonica Group], gi|115441423|ref|...
600.0 [0..12] [650..3]
gi|60657592 - gi|60657592|gb|AAX33317.1| secondary cell wall-related glycosyltransferase family 8 [Populus tremula...
598.0 [0..15] [654..7]

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Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK  60
   61 NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS HSSSRWIWRR QDPRYFSDLD 120
  121 INWDDVTKTL ENIEEGRTIG VLNFDSNEIQ RWREVSKSKD NGDEEKVVVL NLDYADKNVT 180
  181 WDALYPEWID EEQETEVPVC PNIPN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [206-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IKVPTRRLDL IVVKLPCRKE GNWSRDVGRL HLQLAAATVA ASAKGFFRGH VFFVSRCFPI  60
   61 PNLFRCKDLV SRRGDVWLYK PNLDTLRDKL QLPVGSCELS LPLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [310-659]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IQDRPSLGNP KREAYATILH SAHVYVCGAI AAAQSIRQSG STRDLVILVD DNISGYHRSG  60
   61 LEAAGWQIRT IQRIRNPKAE KDAYNEWNYS KFRLWQLTDY DKIIFIDADL LILRNIDFLF 120
  121 SMPEISATGN NGTLFNSGVM VIEPCNCTFQ LLMEHINEIE SYNGGDQGYL NEVFTWWHRI 180
  181 PKHMNFLKHF WIGDEDDAKR KKTELFGAEP PVLYVLHYLG MKPWLCYRDY DCNFNSDIFV 240
  241 EFATDIAHRK WWMVHDAMPQ ELHQFCYLRS KQKAQLEYDR RQAEAANYAD GHWKIRVKDP 300
  301 RFKICIDKLC NWKSMLRHWG ESNWTDYESF VPTPPAITVD RRSSLPGHNL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.0
Match: 1zcvA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle