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View Structure Prediction Details

Protein: GGPP7_ARATH
Organism: Arabidopsis thaliana
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GGPP7_ARATH.

Description E-value Query
Range
Subject
Range
gi|20386366 - gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus incanus subsp. cr...
333.0 [0..2] [347..32]

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Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLNLSIFP SVKISSSASI PGFIKIQPFL LRRKLSTVLS VTARDEGIIH NHFDFTSYMI  60
   61 GKANAVNEAL DSAVSLREPI KIHEAIRYSL LARGKRVRPV LCIAACELVG GEESVALPAA 120
  121 CAVEMIHTMS LIHDDLPCMD NDDLRRGKPT NHKVFGEDVA VLAGDALISF AFEHLATSTA 180
  181 VSPARVVRAI GELAKAIGSK GLVAGQVVDL TSGGMDQNDV GLEVLEFIHV HKTAVLLEAA 240
  241 TVLGAIVGGG SDEEVEKLRR FARCIGLLFQ VVDDILDVTK SSEELGKTAG KDLIADKLTY 300
  301 PKLMGLEKSK DFADKLLSDA HEQLHGFDSS RVKPLLALAN YIAKRQN

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Detection Method: PSI-BLAST
Confidence: 76.522879
Match: 2j1pA
Description: No description for 2j1pA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle