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View Structure Prediction Details

Protein: RA51C_ARATH
Organism: Arabidopsis thaliana
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RA51C_ARATH.

Description E-value Query
Range
Subject
Range
gi|53753553, gi|... - gi|54293721|ref|YP_126136.1| replicative DNA helicase [Legionella pneumophila str. Lens], gi|5375355...
275.0 [0..6] [348..94]

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Predicted Domain #1
Region A:
Residues: [1-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISFGRRKSP AIEETSLATS VMEAWRLPLS PSIRGKLISA GYTCLSSIAS VSSSDLARDA  60
   61 NITEEEAFEI LKLANQSCCN GSRSLINGAK NAWDMLHEEE SLPRITTSCS DLDNILGGGI 120
  121 SCRDVTEIGG VPGIGKTQIG IQLSVNVQIP RECGGLGGKA IYIDTEGSFM VERALQIAEA 180
  181 CVEDMEEYTG YMHKHFQANQ VQMKPEDILE NIFYFRVCSY TEQIALVNHL EKFISENKDV 240
  241 KVVIVDSITF HFRQDYDDLA QRTRVLSEMA LKFMKLAKKF SLAVVLLNQV TTKFSEGSFQ 300
  301 LALALGDSWS HSCTNRVILY WNGDERYAYI DKSPSLPSAS ASYTVTSRGL RNSSSSSKRV 360
  361 KMM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.0
Match: 2bkeA
Description: Conformational Flexibility Revealed by the Crystal Structure of a Crenarchaeal RadA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle