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View Structure Prediction Details

Protein: gi|15222523, gi|...
Organism: Arabidopsis thaliana
Length: 606 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222523, gi|....

Description E-value Query
Range
Subject
Range
gi|12321463, gi|... - pir||G86443 probable terpene synthase type protein [imported] - Arabidopsis thaliana, gi|12321463|gb...
770.0 [0..1] [606..1]

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Predicted Domain #1
Region A:
Residues: [1-606]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAIRIGFGL PNVHSVPLCL TTTRCLFPRQ RLLHSHTPSW KPAKQQDFFV ASSSKKSSDD  60
   61 LESSLPTPHF SPSLWGDHFL SVSLNRAVEF DELEREIETT KPLARDKLMS SESSDKEKIR 120
  121 LIHLLVSMGI SYHFDKEIQD ILKHSFTKLD DIIVGEDDLE TISIMFEVFK LYGHKMSCDA 180
  181 FDRFRGNDGR FKESLVRDFR GMLQLFEVAH LGTPCEVIMD EALSFTRNHL ESLTSGNAST 240
  241 ASPHLLKHIQ NSLYIPRYCN IEVLVAREYI SYYEQEEGHD EILLKFAKLN FNFCQFHYVQ 300
  301 ELKTLTKWWR DLDLASKLPY IRDRLVESHL VALGPYFEPH YSLGRIIVAK INMIMVVVDD 360
  361 TYDAYATLPQ VKALTECLQS IEVSDKLPDY LRIVLGSLFD VMGEIEREMR PLGRLYRVKQ 420
  421 VVEKIKIITK AYQEIAKWAR TGHVSTFDEY MKVGVLTAGM ADYAAYCFIG MEDINEKEAF 480
  481 EWLNSNPLII KHLTAMFRLA NDVGTYETEI NRGEVANGLN CYMKQYGVTK EEASRELRKM 540
  541 YVYRKKVVVE EFMNSHDHVP RQVLLRCLNI ARIFDVFYTE GDGYSEPKGK IEHFMTSLYL 600
  601 HPIPLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 5eauA
Description: 5-EPI-ARISTOLOCHENE SYNTHASE FROM NICOTIANA TABACUM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.87397377711135 bayes_pls_golite062009
transferase activity 1.34929557841705 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 1.22586398285056 bayes_pls_golite062009
prenyltransferase activity 0.302854173865421 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle