| Protein: | SMC22_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1171 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for SMC22_ARATH.
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Region A: Residues: [1-179] |
1 11 21 31 41 51
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1 MHIKEICLEG FKSYATRTVV PGFDPHFNAI TGLNGSGKSN ILDSICFVLG ITNLQQVRAA 60
61 NLQELVYKQG QAGITRATVS VTFDNSERNR SPLGHEDHSE ITVTRQIVVG GKNKYLINGK 120
121 LAQPNQVQNL FHSVQLNVNN PHFLIMQGRI TKVLNMKPME ILSMLEEAAG TRMYENKKE
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| Detection Method: |  |
| Confidence: | 50.39794 |
| Match: | 1xewX |
| Description: | Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases. |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [180-463] |
1 11 21 31 41 51
| | | | | |
1 AALKTLEKKQ TKVDEINKLL EKDILPALEK LRREKSQYMQ WANGNAELDR LKRFCVAFEY 60
61 VQAEKIRDNS IHVVEEMKIK MTGIDEQTDK TQGEISELEK QIKALTQARE ASMGGEVKAL 120
121 SDKVDSLSNE VTRELSKLTN MEDTLQGEEK NAEKMVHNIE DLKKSVEERA SALNKCDEGA 180
181 AELKQKFQEF STTLEECERE HQGILAGKSS GDEEKCLEDQ LRDAKISVGT AETELKQLNT 240
241 KISHCEKELK EKKSQLMSKQ DEAVAVENEL DARKNDVESV KRAF
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| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [464-552] |
1 11 21 31 41 51
| | | | | |
1 DSLPYKEGQM EALEKDRESE LEIGHRLKDK VHELSAQLAN VQFTYRDPVK NFDRSKVKGV 60
61 VAKLIKVNDR SSMTALEVTA GGKLFNVIV
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| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 1gxlA |
| Description: | Smc hinge domain |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [553-1020] |
1 11 21 31 41 51
| | | | | |
1 DTEDTGKQLL QKGDLRRRVT IIPLNKIQSH LVPPRVQQAT VGKGNAELAL SLVGYSEELK 60
61 NAMEYVFGST FVCKTTDAAK EVAFNREIRT PSVTLEGDVF QPSGLLTGGS RKGGGDLLRQ 120
121 LHDLAEAETK FRAHQKSLSE IEANIKELQP LQTKFTDMKA QLELKMYDMS LFLKRAEQNE 180
181 HHKLGDAVKK LEEEVEEMRS QIKEKEGLYK SCADTVSTLE KSIKDHDKNR EGRLKDLEKN 240
241 IKTLKARIQA SSKDLKGHEN VRERLVMEQE AVTQEQSYLK SQLTSLRTQI STLASDVGNQ 300
301 RAKVDAIQKD HDQSLSELKL IHAKMKECDT QISGSIAEQE KCLQKISDMK LDRKKLENEV 360
361 TRMEMEHKNC SVKVDKLVEK HTWITSEKRL FGNGGTDYDF ESRDPHKARE ELERLQTDQS 420
421 SLEKRVNKKV TAMFEKAEDE YNALMTKKNI IETDKSKIKK VIEELDEK
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| Detection Method: | |
| Confidence: | 4.154902 |
| Match: | 1ciiA |
| Description: | COLICIN IA |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [1021-1171] |
1 11 21 31 41 51
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1 KKETLKVTWV KVNQDFGSIF STLLPGTMSK LEPPEGGTFL DGLEVRVAFG DVWKQSLSEL 60
61 SGGQRSLLAL SLILALLLFK PAPIYILDEV DAALDLSHTQ NIGRMIKSHF PHSQFIVVSL 120
121 KEGMFSNADV LFRTKFVDGV STVQRTVTKQ S
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| Detection Method: | |
| Confidence: | 24.30103 |
| Match: | 1xewY |
| Description: | Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases. |
| Matching Structure (courtesy of the PDB): |
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