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View Structure Prediction Details

Protein: JAL27_ARATH
Organism: Arabidopsis thaliana
Length: 467 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JAL27_ARATH.

Description E-value Query
Range
Subject
Range
JAL28_ARATH - Nitrile-specifier protein 1 OS=Arabidopsis thaliana GN=NSP1 PE=2 SV=2
350.0 [0..1] [466..1]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKLVAQGG ETGDVWDDGV YDNVTKVYVG QGQYGIAFVK FEYANGSEVV VGDEHGEKTE  60
   61 LGVEEFEIDS DDYIVYVEGY REKVSDMTSE MITFLSFKT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.92
Match: 1j4sA
Description: Artocarpin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [100-467]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKGKTSQPIV KKPGVKFVLH GGKIVGFHGR STDVLHSLGA YVSLPSTPKL LGNWIKVEQN  60
   61 GEGPGLRCSH GIAQVGNKIY SFGGELIPNQ PIDKHLYVFD LETRTWSIAP ATGDVPHLSC 120
  121 LGVRMVSVGS TLYTFGGRDF SRQYNGFYSF DTTTNEWKLL TPVEEGPTPR SFHSMAADEE 180
  181 NVYVFGGVGA MDRIKTLDSY NIVDKTWFHC SNPGDSFSIR GGAGLEVVQG KVWIVYGFNG 240
  241 CEVDDVHFYD PAEDKWTQVE TFGVKPNERS VFASAAIGKH IVIFGGEIAM DPRAHVGPGQ 300
  301 LIDGTFALDT ETLQWERLDK FEGTPSSRGW TASTTGTIDG KKGLVMHGGK APTNDRFDDL 360
  361 FFYGIDSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.39794
Match: 1x2jA
Description: Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle