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View Structure Prediction Details

Protein: MYO16_ARATH
Organism: Arabidopsis thaliana
Length: 1242 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for MYO16_ARATH.

Predicted Domain #1
Region A:
Residues: [1-1047]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENIMVDSH VWVEDPERAW IDGVVLNIKG EEAEIKTNDG RDVIANLSRL YPKDTEAPSE  60
   61 GVEDMTRLSY LHEPAVLDNL ATRYELNEIY TYTGNILIAV NPFQGLPHLY DAEVMEKYKE 120
  121 AYFKELNPHV FAIGGIAYRE MINEGRNKCI LVSGESGSGK TETTKMLMRY LAYFGGHTAV 180
  181 EGRTVENQVL ESNPVLEAFG NAKTVKNNNS SRFGKFVEIQ FDDVGRISGA AIRTYLLERS 240
  241 RVCQVSDPER NYHCFYLLCA APPEDVERFK LGDPKSFRYL NQSSCYKLDG VNDAEEYLAT 300
  301 RRAMDVVGIS EKEQDAIFRV VASILHLGNI EFSKGEDADS SSVKDEQSMF HLQMTSELLM 360
  361 CDPHSLEDAL CKRMMVTPEE VIKRSLDPLG AAVSRDGLAK TIYSRLFDWL VNKINISIGQ 420
  421 DSHSRRLIGV LDIYGFESFK TNSFEQFCIN YTNEKLQQHF NQHVFKMEQG EYQKEEIDWS 480
  481 YVEFVDNKDV VDLIEKKPGG IIALLDEACM LPKSTPETFS EKLYHTFKDH KRFMKPKLTR 540
  541 SDFTLVHYAG DVQYQSDQFL DKNKDYVVAE HQDLLNASKC SFVSGLFPPL PKESSKSKFS 600
  601 SIGARFKLQL QQLMETLNST EPHYIRCVKP NNLLQPTVFD NANVLHQLRS GGVLEAIRVK 660
  661 CAGYPTNRTF IEFLNRFLIL APEILKGEYE AEVACKWILE KKGLTGYQIG KSKVFLRAGQ 720
  721 MAELDAHRTR VLGESARMIQ GQVRTRLTRE RFVLMRRASV NIQANWRGNI ARKISKEMRR 780
  781 EEAAIKIQKN LRRQIAKKDY GKTKSSALTL QSGVRTMAAR HEFRYKLTTR AATVIQAYWR 840
  841 GYSAISDYKK LKRVSLLCKS NLRGRIARKQ LGQSKQADRK EETEKERKVE LSNRAEEAVD 900
  901 MSFVLHSEQS DDAESGHGRK AKLSIESEDG LDKSSVLHSE QSDDEELGHE RKTKLSIESE 960
  961 DGHSDQSDDE EIEHERKTKH CIQAEDGIEK SYVMHSDQSD DEEIGHKRKT KHSIQAEDGI1020
 1021 EKSFVVHSDQ SDDEEIGHER KTKHAIQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [1048-1242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEDGIQKSFV TCSEKPYNTF SVVSQITSPI RDTEIESLTA EVEMLKALLQ VEKQRADISE  60
   61 RKCAEARELG ERRRKRLEET ERRVYQLQDS LNRLLYSMSD QFSQLKSILR SPSMSASTMA 120
  121 SAPVVRDDLA DSSENSEASS SDSDFTFPAP SPSSDNFSTF NPNQLQVIVQ DLSTTEAKGT 180
  181 ESYDSDKEGG FEDYF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.221849
Match: 1c1gA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle