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View Structure Prediction Details

Protein: FTSHB_ARATH
Organism: Arabidopsis thaliana
Length: 806 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for FTSHB_ARATH.

Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTLQASL FLRPPLHTSS FKLYPCLFSS SSLSFCPQSL SSFYRLSSVL HNSRFRPLPC  60
   61 SLRQDNVASD SDFIPKDSAF EVTDSA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESNRLVSDTE VSELETNDRF VGGEETKSGG EEAEVSNGVT EGKEEDQKKS KFRIVVLMMA  60
   61 LWAAIKRAIE KVMEWEWLSW WPFSRQEKRL EKLIAEADAN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.30103
Match: 2aneA
Description: Crystal structure of N-terminal domain of E.Coli Lon Protease
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [187-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKDAALQGAL LAELNKHIPE AVVQRFEQRE HTVDSRGVAE YIRALVITNA ISEYLPDEQT  60
   61 GKPSSLPALL QELKHRASGN MDESFVNPGI SEKQPLHVTM VNPKVSNKSR FAQELVSTIL 120
  121 FTVAVGLVWI MGAAALQKYI GSLGGIGTSG VGSSSSYSPK ELNKEIT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [354-584]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEKNVKTFKD VKGCDDAKQE LEEVVEYLKN PSKFTRLGGK LPKGILLTGA PGTGKTLLAK  60
   61 AIAGEAGVPF FYRAGSEFEE MFVGVGARRV RSLFQAAKKK APCIIFIDEI DAVGSTRKQW 120
  121 EGHTKKTLHQ LLVEMDGFEQ NEGIIVMAAT NLPDILDPAL TRPGRFDRHI VVPSPDVRGR 180
  181 EEILELYLQG KPMSEDVDVK AIARGTPGFN GADLANLVNI AAIKAAVEGA E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.154902
Match: 1lv7A
Description: AAA domain of cell division protein FtsH
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [585-658]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLSSEQLEFA KDRIVMGTER KTMFVSEDSK KLTAYHESGH AIVALNTKGA HPIHKATIMP  60
   61 RGSALGMVTQ LPSN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [659-806]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DETSVSKRQL LARLDVCMGG RVAEELIFGL DHITTGASSD LSQATELAQY MVSSCGMSEA  60
   61 IGPVHIKERP SSDMQSRIDA EVVKLLREAY ERVKSLLKRH EKQLHTLANA LLEYETLTAE 120
  121 DIKRILLPKQ EGEKFEEQQQ EEGDLVLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 123.0
Match: 2ce7A
Description: EDTA treated
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle