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View Structure Prediction Details

Protein: gi|10177017, gi|...
Organism: Arabidopsis thaliana
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177017, gi|....

Description E-value Query
Range
Subject
Range
gi|114615933 - gi|114615933|ref|XP_001156440.1| PREDICTED: carboxypeptidase A2 (pancreatic) [Pan troglodytes]
342.0 [0..2] [381..31]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSYKPYEAS TNLEEEEEEE IRFFPFLSSL PLSRRGHASA ASLPANLLRG LPPLTIVVVT  60
   61 RRKIHFSVLI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.045757
Match: 1ayeA
Description: HUMAN PROCARBOXYPEPTIDASE A2
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [71-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IIVFYVRCSD DLMEQIHSLV HRHPDKLSIE LIKSGNKGYN AEVNVVTYCR GGKESDDRSN  60
   61 FRILLTFGQH GRELITSELA FRILSILSEE QFLPNKNGGI LKNTLDKLVI KMVPIENPNG 120
  121 RKRVESGDLC ERRNGRGVDL NRNWGVDWGK KEKDYDPSEE NPGTAPFSEP ETQIMRKLAI 180
  181 SFDPHIWINV HSGMEALFMP YDHKNITPEG LPSQKMRTLL EKLNKFHCHD RCMIGSGGGS 240
  241 VGYLAHGTAT DYIYDVVKAP MAFTFEIYGD NQTASRDCFK MFNPVDLPNF KRVLNDWSAA 300
  301 FFTIFQLGPL HLDGNTSKAA DKWVSIDEYL DGYLVERKNR YGKNMEVIDV GMQEIKTYFR 360
  361 LFLLSSVLLM FMFCSRIAKS KYSRNSMPVL P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.39794
Match: 2nsmA
Description: No description for 2nsmA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle