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View Structure Prediction Details

Protein: HSPR2_ARATH
Organism: Arabidopsis thaliana
Length: 435 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HSPR2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593007 - gi|21593007|gb|AAM64956.1| putative nematode-resistance protein [Arabidopsis thaliana]
837.0 [0..1] [435..1]

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Predicted Domain #1
Region A:
Residues: [1-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDMDWKRKM VSSDLPNSPK LSSKLHVTIP SPFKIVPVSS PISCSAPALC SAYELYLRLP  60
   61 ELRKLWSSRD FPQWTSEPIL KPALQALEIS FRLVFAVCSD TRPYINHREW NRRLDSLITK 120
  121 QIQLVAAICE DEEEEGISAE APVGGGRSSL SLLPQLATWR RSEALGKKIL YTIDNEMSRC 180
  181 KYTLGL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 128.920819
Match: PF07231.3
Description: No description for PF07231.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [187-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEQNIAGKPN LRYDAICRPN EIYSLKDNPY ADHIDNHENQ TLYIIHQILE SWIYASGNLL  60
   61 NRIVSSIEEE KFGKASNDVY LLEKIWKILA EIEDLHMLMD PEDFLKLKKQ LQIKSTGKND 120
  121 AFCFRSKGLV EMMKMSKDLR QKVPAVLAVE VDPTGGPRLQ EAAMKLYARK TECDKIHLLQ 180
  181 GMQAVEAAAK SFFFGYRQLV AAMMGSAEMN ATASQESCDS LSQIFMEPTY FPSLDAAKTF 240
  241 LGEFWSHLG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.38
Match: 2noxA
Description: No description for 2noxA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle