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View Structure Prediction Details

Protein: gi|15217720, gi|...
Organism: Arabidopsis thaliana
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15217720, gi|....

Description E-value Query
Range
Subject
Range
gi|22297600, gi|... - gi|22297600|ref|NP_680847.1| GTP-binding protein Era [Thermosynechococcus elongatus BP-1], gi|222937...
214.0 [0..16] [301..19]

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Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDRAQPSAS EPVRNIVLVG PTGNGKSSTG NSLIGKEVFI LETVECKTCK AKTLDGQIIN  60
   61 VIDTPGLFDL SVSTDYMNKE IINCLTLTDG GLHAVVLVLS VGTDILKEEE AALNKLQLLF 120
  121 GSKIVDYLVV LFTGGDVLEK ENKTLDDYLS RGCPEFLKTV LRLCGGRRVL FNNKTTDEVK 180
  181 KIEQVKQLLA HVEAIENLNG GKALFTEEND LNEKRQGEML MEQEMEVQSK KPENTEVEEM 240
  241 KKQLEISYGQ QMNMMAQMVE DTLKESSASH ERMLLALKDK VERSYLENED MHNETKRCNI 300
  301 L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.69897
Match: 1egaA
Description: GTPase Era, N-terminal domain; GTPase Era C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleoside-triphosphatase activity 0.166100211611062 bayes_pls_golite062009
pyrophosphatase activity 0.159702441149605 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.149170905385965 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.147838751017739 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle