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View Structure Prediction Details

Protein: gi|18394294, gi|...
Organism: Arabidopsis thaliana
Length: 242 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18394294, gi|....

Description E-value Query
Range
Subject
Range
gi|21618310 - gi|21618310|gb|AAM67360.1| unknown [Arabidopsis thaliana]
296.0 [0..3] [242..1]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLLRCLRR SFIFSSSTSI AYRNPRICVQ SNQSYIFLSS RKFLSSGSYV SEMRRTAFEG  60
   61 NILRLIRLEI QSELDHSPIL QPEESFGPFT VDERPGEQWI SLRRKFGEKE DIKIEATMFD 120
  121 GSVPSSKSTT SDPEDVQLHI TFIVNISKGD GETLEIMCSA WPDTIQITKF FVRKSSQNSP 180
  181 NAYIGPEFQE MEDELQDSVY RFLEERGISD DLAEFLHQYM KNKDKAEYIR WMETVKSYVE 240
  241 QK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.39794
Match: 1p32A
Description: Acidic mitochondrial matrix protein p32
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle