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View Structure Prediction Details

Protein: KCS5_ARATH
Organism: Arabidopsis thaliana
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCS5_ARATH.

Description E-value Query
Range
Subject
Range
gi|17979464, gi|... - gi|20334738|gb|AAM16230.1| At1g68530/T26J14_10 [Arabidopsis thaliana], gi|17979464|gb|AAL50069.1| At...
469.0 [0..1] [492..6]

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Predicted Domain #1
Region A:
Residues: [1-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDFSSSVKL KYVKLGYQYL INNFLTLLLI PVIATVAIEL LRMGPEEILS VLNSLHFELL  60
   61 HILCSSFLII FVSTVYFMSK PRTVYLVDYS CYKPPVTCRV PFSSFMEHSR LILKDNPKSV 120
  121 EFQMRILERS GLGEETCLPP AIHYIPPTPT MESARNEAQM VIFTAMEDLF KNTGLKPKDI 180
  181 DILIVNCSLF SPTPSLSAMI INKYKLRSNI KSYNLSGMGC SASLISVDVA RDLLQVHPNS 240
  241 NAIIISTEII TPNYYKGNER AMLLPNCLFR MGGAAILLSN RRSDRWRAKY KLCHLVRTHR 300
  301 GADDKSYNCV MEQEDKNGNV GINLSKDLMT IAGEALKANI TTIGPLVLPA SEQLLFLSSL 360
  361 IGRKIFNPKW KPYIPDFKQA FEHFCIHAGG RAVIDELQKN LQLSGEHVEA SRMTLHRFGN 420
  421 TSSSSLWYEL SYIEAQGRMK RNDRVWQIAF GSGFKCNSAV WKCNRTIKTP TDGAWSDCIE 480
  481 RYPVFIPEVV KL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.0
Match: 1bq6A
Description: Chalcone synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.14505178497871 bayes_pls_golite062009
transferase activity 1.38158753865981 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.12155569250025 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.03445196061197 bayes_pls_golite062009
acyltransferase activity 0.919789551144134 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] synthase activity 0.115776595790057 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle