| Protein: | HDG12_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 687 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HDG12_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
788.0 | [0..2] | [684..85] |
|
|
782.0 | [0..4] | [686..9] |
|
|
781.0 | [0..3] | [681..94] |
|
|
770.0 | [0..6] | [686..42] |
|
|
767.0 | [0..3] | [686..85] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MEFLGDSQNH DSSETEKKNK KKKRFHRHTP HQIQRLESTF NECQHPDEKQ RNQLSRELGL 60
61 APRQIKFWFQ
|
| Detection Method: |  |
| Confidence: | 19.69897 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [71-193] |
1 11 21 31 41 51
| | | | | |
1 NRRTQKKAQH ERADNCALKE ENDKIRCENI AIREAIKHAI CPSCGDSPVN EDSYFDEQKL 60
61 RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS 120
121 SMS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.348 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.346 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.342 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.338 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.295 | a.7.4 | Smac/diablo |
| View | Download | 0.295 | a.7.4 | Smac/diablo |
| View | Download | 0.260 | a.25.1 | Ferritin-like |
| View | Download | 0.259 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.258 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.253 | a.25.1 | Ferritin-like |
|
Region A: Residues: [194-449] |
1 11 21 31 41 51
| | | | | |
1 VPSLPSQPNL VLSEMDKSLM TNIAVTAMEE LLRLLQTNEP LWIKTDGCRD VLNLENYENM 60
61 FTRSSTSGGK KNNLGMEASR SSGVVFTNAI TLVDMLMNSV KLTELFPSIV ASSKTLAVIS 120
121 SGLRGNHGDA LHLMIEELQV LSPLVTTREF CVLRYCQQIE HGTWAIVNVS YEFPQFISQS 180
181 RSYRFPSGCL IQDMSNGYSK VTWVEHGEFE EQEPIHEMFK DIVHKGLAFG AERWIATLQR 240
241 MCERFTNLLE PATSSL
|
| Detection Method: | |
| Confidence: | 2.79 |
| Match: | 2r55A |
| Description: | No description for 2r55A was found. |
|
Region A: Residues: [450-572] |
1 11 21 31 41 51
| | | | | |
1 DLGGVIPSPE GKRSIMRLAH RMVSNFCLSV GTSNNTRSTV VSGLDEFGIR VTSHKSRHEP 60
61 NGMVLCAATS FWLPISPQNV FNFLKDERTR PQWDVLSNGN SVQEVAHITN GSNPGNCISV 120
121 LRG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.726 | d.326.1 | Description not found. |
| View | Download | 0.686 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.537 | d.110.4 | SNARE-like |
| View | Download | 0.534 | d.82.2 | Frataxin-like |
| View | Download | 0.534 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.534 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.534 | b.97.1 | Anemone pore-forming cytolysin |
| View | Download | 0.482 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.446 | b.29.1 | Concanavalin A-like lectins/glucanases |
| View | Download | 0.434 | d.82.2 | Frataxin-like |
|
Region A: Residues: [573-687] |
1 11 21 31 41 51
| | | | | |
1 FNASSSQNNM LILQESCIDS SSAALVIYTP VDLPALNIAM SGQDTSYIPI LPSGFAISPD 60
61 GSSKGGGSLI TVGFQIMVSG LQPAKLNMES METVNNLINT TVHQIKTTLN CPSTA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.597 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.571 | N/A | N/A | a.246.1 | Description not found. |
| View | Download | 0.566 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.562 | N/A | N/A | d.20.1 | UBC-like |
| View | Download | 0.525 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.509 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.456 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.437 | N/A | N/A | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.419 | N/A | N/A | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
