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View Structure Prediction Details

Protein: FBX10_ARATH
Organism: Arabidopsis thaliana
Length: 377 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBX10_ARATH.

Description E-value Query
Range
Subject
Range
FB340_ARATH - Probable F-box protein At5g47300 OS=Arabidopsis thaliana GN=At5g47300 PE=3 SV=1
180.0 [0..1] [374..41]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVNLPWEL VEEILYRVPP QSLARFRTVC KQWNSLFDDN KFVNDHLVRS RPQFMFRTDS  60
   61 KMYSVAVNFS GPWIEVHELT LDIPGLNCEM PIWLYNYVDC DGLLFCTSYK FKGVLIWNPW 120
  121 LKQTRLFASN HHYPTKYVIG YDNKKRYKVL DYEFEPSSKL TIYEIGLYSK KVKDLESDSS 180
  181 WSVVQSNSVS LNGTLYWAGV DVNNGIFIRS FS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.0
Match: 2ovpB
Description: No description for 2ovpB was found.

Predicted Domain #2
Region A:
Residues: [213-377]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSTERLTTFC RLPLKYNEDN ILALAVFRKD RFSLLKLCNK TSKIKIWLTK NSINNREIGL  60
   61 VEDVVWIKLM TVLIPDFPKL PFRWYNRPDL TYFLDNDDAK RLVICCYDET QQVYIYIVRR 120
  121 NIVKKIKIDL FEDLLDQSSP HLRTYIPSLV RPTQVKEDNN KLYVL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 20.420216
Match: PF07734.4
Description: No description for PF07734.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle