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View Structure Prediction Details

Protein: gi|6630552, gi|1...
Organism: Arabidopsis thaliana
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6630552, gi|1....

Description E-value Query
Range
Subject
Range
gi|109066641, gi... - gi|109066643|ref|XP_001091631.1| PREDICTED: similar to transmembrane emp24 protein transport domain ...
239.0 [0..13] [217..16]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISPVLFIG LIYLAGGGSL FPGVEAIWLT VPESGERCVY EEIQANVVVV LDYICIDDAF  60
   61 TQLGPTLDVR VTSPYGKELY KIANVTHGQA AFTTSESGTF LACLAMHHDQ SHHSVNSSVI 120
  121 VSLDWKMGI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.619789
Match: PF01105.15
Description: No description for PF01105.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [130-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RAKDWDSVAK KEKIEAMELE IRRSTEYASA IRANILYLRI REAYMREINE KTNTRVNQLG  60
   61 LMSLGVAIVV SISQVLYLKR YFLKKKLI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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