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View Structure Prediction Details

Protein: XPT_ARATH
Organism: Arabidopsis thaliana
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XPT_ARATH.

Description E-value Query
Range
Subject
Range
gi|12060553 - gi|12060553|gb|AAG48163.1|AF209211_1 phosphate/pentose phosphate translocator [Arabidopsis thaliana]
219.0 [0..1] [417..1]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLNLSPSL NPGLLHKTRT CQQPTRLSAL LVTNPKPFNH RHPLGLSPIP NLQIRDVSAK  60
   61 PLLSLTNPES SSGFSRKPRS IAAVGSSDSN PDEKSD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGEAEKKEKK AKTLQLGIVF GLWYFQNIVF NIFNKKALNV FPYPWLLASF QLFAGSIWML  60
   61 VLWSFKLYPC PKISKPFIIA LLGPALFHTI GHISACVSFS KVAVSFTHVI KSAEPVFSVI 120
  121 FSSLLGDSYP LAVWLSILPI VMGCSLAAVT EVSFNLGGLS GAMISNVGFV LRNIYSKRSL 180
  181 QSFKEIDGLN LYGCISILSL LYLFPVAIFV EGSHWVPGYH KAIASVGTPS TFYFWVLLSG 240
  241 VFYH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 2npkA
Description: No description for 2npkA was found.

Predicted Domain #3
Region A:
Residues: [341-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYNQSSYQAL DEISPLTFSV GNTMKRVVVI ISTVLVFRNP VRPLNALGSA IAIFGTFLYS  60
   61 QATAKKKKIE VGGDKKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.09691
Match: 2i68A
Description: No description for 2i68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle