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View Structure Prediction Details

Protein: JAL21_ARATH
Organism: Arabidopsis thaliana
Length: 471 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JAL21_ARATH.

Description E-value Query
Range
Subject
Range
JAL28_ARATH - Nitrile-specifier protein 1 OS=Arabidopsis thaliana GN=NSP1 PE=2 SV=2
382.0 [0..1] [471..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQKVEARGG EIGDVWDDGA YDGVRKVYVG QGEDGIAFVK FEYVNGSQEV VGDERGKKTL  60
   61 LGAEEFEVDP DDYIVYVEGY HEKVFGVTTK EIISTLTFKT YKGKTSPPFG IVSGTKFVLQ 120
  121 GGKIVGFHGR STDVLHS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.0
Match: 1xxqA
Description: Structure of a mannose-specific jacalin-related lectin from Morus nigra
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [138-471]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGAYISSPAT PKLRGKWIKV EQKGEGPGPR CSHDIAQVGN KIFSFGGELT PNQPIDKHLY  60
   61 VFDLETRTWS ISPATGDVPN LSCLGVRMVS IGSSLYVFGG RDASRKYNGF YSFDTTKNEW 120
  121 KLLTPVEQGP TPRSFHSMTA DENNVYVFGG VSATVRLKTL DAYNIVDHKW VQCSTPGGSC 180
  181 SVRGGAGLEV VQGKVWVVYG FNGCEVDDVH CYDPAQDKWT QVETFGEKPC ARSVFASAVV 240
  241 GKHILVFGGE IAMDPKAHEG PGQLSGGTFA LDTETLKWEK LDKLGEEEET PSIRGWSAST 300
  301 TGTIDGKKGL VMFGGKAQTN DRFGDLFFYG VDSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 1x2jA
Description: Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle