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View Structure Prediction Details

Protein: gi|15240788, gi|...
Organism: Arabidopsis thaliana
Length: 469 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240788, gi|....

Description E-value Query
Range
Subject
Range
gi|220953558, gi... - gi|220953558|gb|ACL89322.1| rept-PA [synthetic construct], gi|220943516|gb|ACL84301.1| rept-PA [synt...
rept-PA, FBpp030... - The gene reptin is referred to in FlyBase by the symbol Dmel\rept (CG9750, FBgn0040075). It is a pro...
gi|195352331, gi... - gi|195352331|ref|XP_002042666.1| GM15014 [Drosophila sechellia], gi|194124550|gb|EDW46593.1| GM15014...
gi|194197468, gi... - gi|195591461|ref|XP_002085459.1| GD14791 [Drosophila simulans], gi|194197468|gb|EDX11044.1| GD14791 ...
285.0 [0..1] [457..1]

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Predicted Domain #1
Region A:
Residues: [1-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELKLSESR DLTRVERIGA HSHIRGLGLD SALEPRAVSE GMVGQVKARK AAGVILQMIR  60
   61 EGKIAGRAIL IAGQPGTGKT AIAMGMAKSL GLETPFAMIA GSEIFSLEMS KTEALTQSFR 120
  121 KAIGVRIKEE TEVIEGEVVE VQIDRPASSG VASKSGKMTM KTTDMETVYD MGAKMIEALN 180
  181 KEKVQSGDVI AIDKATGKIT KLGRSFSRSR DYDAMGAQTK FVQCPEGELQ KRKEVVHCVT 240
  241 LHEIDVINSR TQGFLALFTG DTGEIRSEVR EQIDTKVAEW REEGKAEIVP GVLFIDEVHM 300
  301 LDIECFSFLN RALENEMSPI LVVATNRGVT TIRGTNQKSP HGIPIDLLDR LLIITTQPYT 360
  361 DDDIRKILEI RCQEEDVEMN EEAKQLLTLI GRDTSLRYAI HLITAAALSC QKRKGKVVEV 420
  421 EDIQRVYRLF LDVRRSMQYL VEYQSQYMFS EPIKNDEAAA EDEQDAMQI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.30103
Match: 2c9oA
Description: No description for 2c9oA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle