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View Structure Prediction Details

Protein: gi|15231756, gi|...
Organism: Arabidopsis thaliana
Length: 359 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15231756, gi|....

Description E-value Query
Range
Subject
Range
COMT1_CATRO - Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1
320.0 [0..2] [359..9]

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Predicted Domain #1
Region A:
Residues: [1-359]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENESSESRN RARLAIMELA NMISVPMSLN AAVRLGIADA IWNGGANSPL SAAEILPRLH  60
   61 LPSHTTIGGD PENLQRILRM LTSYGVFSEH LVGSIERKYS LTDVGKTLVT DSGGLSYAAY 120
  121 VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKSEEMNGLM QKAMSGVSVP 180
  181 FMKAILDGYD GFKSVDILVD VGGSAGDCLR MILQQFPNVR EGINFDLPEV VAKAPNIPGV 240
  241 THVGGDMFQS VPSADAIFMK WVLTTWTDEE CKQIMKNCYN ALPVGGKLIA CEPVLPKETD 300
  301 ESHRTRALLE GDIFVMTIYR TKGKHRTEEE FIELGLSAGF PTFRPFYIDY FYTILEFQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.39794
Match: 1kywA
Description: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transcription factor activity 1.79440354068555 bayes_pls_golite062009
catalytic activity 1.25333584501255 bayes_pls_golite062009
transferase activity 1.07321114919891 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.837368219068434 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.644010137949015 bayes_pls_golite062009
methyltransferase activity 0.635463629299812 bayes_pls_golite062009
sequence-specific DNA binding 0.47024562506527 bayes_pls_golite062009
transcription repressor activity 0.235712603615905 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle