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View Structure Prediction Details

Protein: PP425_ARATH
Organism: Arabidopsis thaliana
Length: 646 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP425_ARATH.

Description E-value Query
Range
Subject
Range
gi|168023826, gi... - gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens], gi|1626843...
gi|54695178 - gi|54695178|dbj|BAD67154.1| PPR868-14 [Physcomitrella patens]
655.0 [0..1] [646..239]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPTQTLFSP GGNSPASSPA SHPSSLFPQI NNCRTIRDLS QIHAVFIKSG QMRDTLAAAE  60
   61 ILRFCATSDL HHRDLDYAHK IFNQMPQRNC FSWNTIIRGF SESDEDKALI AITLFYEMMS 120
  121 DEFVEPNRFT FPSVLKACAK TGKIQEGKQI HGLALKYGFG GDEFVMSNLV RMYVMCGFMK 180
  181 DAR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.97
Match: 2ondA
Description: No description for 2ondA was found.

Predicted Domain #2
Region A:
Residues: [184-646]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLFYKNIIEK DMVVMTDRRK RDGEIVLWNV MIDGYMRLGD CKAARMLFDK MRQRSVVSWN  60
   61 TMISGYSLNG FFKDAVEVFR EMKKGDIRPN YVTLVSVLPA ISRLGSLELG EWLHLYAEDS 120
  121 GIRIDDVLGS ALIDMYSKCG IIEKAIHVFE RLPRENVITW SAMINGFAIH GQAGDAIDCF 180
  181 CKMRQAGVRP SDVAYINLLT ACSHGGLVEE GRRYFSQMVS VDGLEPRIEH YGCMVDLLGR 240
  241 SGLLDEAEEF ILNMPIKPDD VIWKALLGAC RMQGNVEMGK RVANILMDMV PHDSGAYVAL 300
  301 SNMYASQGNW SEVSEMRLRM KEKDIRKDPG CSLIDIDGVL HEFVVEDDSH PKAKEINSML 360
  361 VEISDKLRLA GYRPITTQVL LNLEEEDKEN VLHYHSEKIA TAFGLISTSP GKPIRIVKNL 420
  421 RICEDCHSSI KLISKVYKRK ITVRDRKRFH HFQDGSCSCM DYW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.045757
Match: 2gw1A
Description: No description for 2gw1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle