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View Structure Prediction Details

Protein: OBE1_ARATH
Organism: Arabidopsis thaliana
Length: 566 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OBE1_ARATH.

Description E-value Query
Range
Subject
Range
gi|110742793 - gi|110742793|dbj|BAE99299.1| hypothetical protein [Arabidopsis thaliana]
497.0 [0..1] [566..1]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTSSGSNLP HQMLPPRQQL QTSLSLVSSD PHLSRSNSGI VRESPAESAS SQETWPTSKS  60
   61 IMGRKTDSGK TGPDSHDQHV IRHVSIADKV SLRDIARERL DIVAERMHRL PEEYLEELKN 120
  121 GLKAILEGNG AQPIDEFMFL QKFVQTRSDL TSKTLVRAHR VQLEVLVVIN TGIQAFLHPN 180
  181 INLSQSSLIE IFVYKRCRNI ACQNELPADG CPCEICANRK GFCNLCMCVI CNKFDFAVNT 240
  241 CRWIGCDVCS HWTHTDCAI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.99
Match: 2o0hA
Description: No description for 2o0hA was found.

Predicted Domain #2
Region A:
Residues: [260-566]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDGEISMGVS PKSVSGMGEM LFKCRACNHT SELLGWVKDV FQHCAPNWDR ESLMKELDFV  60
   61 SRIFRGSEDT RGRKLFWKCE ELMEKIKGGL AEATAAKLIL MFFQEIELDS PKSLESGEGG 120
  121 GTIAPQDACN RIAEVVKETL RKMEIVGEEK TRMYKKARMG LEECEREVEE KAKQVAELQM 180
  181 ERQKKKQQIE EVERIVRLKQ AEAEMFQLKA NEAKVEAERL ERIVKAKKEK TEEEYASNYL 240
  241 KLRLSEAEAE KEYLFEKIKE QESGGNGGEA SQAVMYSKIR EMLHGYNASS PRVDPRSNQR 300
  301 NPFRSNP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle