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View Structure Prediction Details

Protein: AGD9_ARATH
Organism: Arabidopsis thaliana
Length: 402 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGD9_ARATH.

Description E-value Query
Range
Subject
Range
gi|7268541, gi|7... - pir||T05075 hypothetical protein T6K21.70 - Arabidopsis thaliana, gi|7268541|emb|CAB78791.1| putativ...
295.0 [0..2] [402..5]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATENLTDKN VVFRKLKSKS ENKVCFDCSA KNPTWASVPY GIFLCIDCSA VHRSLGVHIS  60
   61 FVRSTNLDSW SPEQLRTMMF GGNNRAQVFF KQHGWNDGGK IEAKYTSRAA DMYRQTLAKE 120
  121 VAKAMAEETV LPSLSSVATS QPVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.522879
Match: 2p57A
Description: No description for 2p57A was found.

Predicted Domain #2
Region A:
Residues: [145-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSENGFTSES PKESSLKQEA AVVSSPKASQ KVVASTFKKP LVSRKSGKTG GLGARKLTTK  60
   61 SKDNLYEQKP EEPVPVIPAA SPTNDTSAAG SSFASRFEYF DDEQSGGQSG TRVLSHVAPP 120
  121 KSSNFFNEFG MDSAFPKKSS SSSSKAQVEE TDEARKKFSN AKSISSAQFF GNQNRDADLD 180
  181 SKATLQKFSG SAAISSSDLF GHGPDDSNID ITASDLINRI SFQAQQDMSS IANLAEETKN 240
  241 KLGTFASSIF SDLQDRML

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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