YRC Public Data Repository - Protein Structure Prediction

Protein:	MAK3_ARATH
Organism:	Arabidopsis thaliana
Length:	190 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAK3_ARATH.

Description	E-value	Query Range	Subject Range
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	141.0	[0..1]	[162..1]

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Predicted Domain #1

Region A:
Residues: [1-190]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKEMEDKEE FDEGEIEYTS YAGEHHLPLI MSLVDQELSE PYSIFTYRYF VYLWPQLCFL  60
   61 AFHKGKCVGT IVCKMGDHRQ TFRGYIAMLV VIKPYRGRGI ASELVTRAIK AMMESGCEEV 120
  121 TLEAEVSNKG ALALYGRLGF IRAKRLYHYY LNGMDAFRLK LLFPKPRVPQ IPSQVQTQQE 180
  181 YETFPRPRVP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.221849
Match:	2ob0A
Description:	No description for 2ob0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits