| Protein: | PPR45_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 866 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPR45_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1020.0 | [0..4] | [866..126] |
|
|
923.0 | [0..3] | [866..19] |
|
|
895.0 | [0..3] | [866..55] |
|
|
886.0 | [0..3] | [866..202] |
|
Region A: Residues: [1-492] |
1 11 21 31 41 51
| | | | | |
1 MASSAQSPHF YLNPGKSNSF QSKAYKQRNV NFYWNFGIRR LFLRKSQGLS VLSSSSSSTH 60
61 FSNSQLHGLC ANGKLEEAMK LLNSMQELRV AVDEDVFVAL VRLCEWKRAQ EEGSKVYSIA 120
121 LSSMSSLGVE LGNAFLAMFV RFGNLVDAWY VFGKMSERNL FSWNVLVGGY AKQGYFDEAM 180
181 CLYHRMLWVG GVKPDVYTFP CVLRTCGGIP DLARGKEVHV HVVRYGYELD IDVVNALITM 240
241 YVKCGDVKSA RLLFDRMPRR DIISWNAMIS GYFENGMCHE GLELFFAMRG LSVDPDLMTL 300
301 TSVISACELL GDRRLGRDIH AYVITTGFAV DISVCNSLTQ MYLNAGSWRE AEKLFSRMER 360
361 KDIVSWTTMI SGYEYNFLPD KAIDTYRMMD QDSVKPDEIT VAAVLSACAT LGDLDTGVEL 420
421 HKLAIKARLI SYVIVANNLI NMYSKCKCID KALDIFHNIP RKNVISWTSI IAGLRLNNRC 480
481 FEALIFLRQM KM
|
| Detection Method: |  |
| Confidence: | 8.154902 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
|
Region A: Residues: [493-777] |
1 11 21 31 41 51
| | | | | |
1 TLQPNAITLT AALAACARIG ALMCGKEIHA HVLRTGVGLD DFLPNALLDM YVRCGRMNTA 60
61 WSQFNSQKKD VTSWNILLTG YSERGQGSMV VELFDRMVKS RVRPDEITFI SLLCGCSKSQ 120
121 MVRQGLMYFS KMEDYGVTPN LKHYACVVDL LGRAGELQEA HKFIQKMPVT PDPAVWGALL 180
181 NACRIHHKID LGELSAQHIF ELDKKSVGYY ILLCNLYADC GKWREVAKVR RMMKENGLTV 240
241 DAGCSWVEVK GKVHAFLSDD KYHPQTKEIN TVLEGFYEKM SEVGL
|
| Detection Method: | |
| Confidence: | 34.30103 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [778-866] |
1 11 21 31 41 51
| | | | | |
1 TKISESSSMD ETEISRDEIF CGHSERKAIA FGLINTVPGM PIWVTKNLSM CENCHDTVKF 60
61 ISKTVRREIS VRDAEHFHHF KDGECSCGD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
