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View Structure Prediction Details

Protein: RH20_ARATH
Organism: Arabidopsis thaliana
Length: 501 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH20_ARATH.

Description E-value Query
Range
Subject
Range
gi|74210167 - gi|74210167|dbj|BAE21355.1| unnamed protein product [Mus musculus]
428.0 [0..1] [501..76]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRYDSRTGD STSYRDRRSD SGFGGTSSYG SSGSHTSSKK DNDGNESPRK LDLDGLTPFE  60
   61 KNFYVESPAV AAMTDTEVEE YRKLREITVE GKDIPKPV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-501]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSFRDVGFPD YVLEEVKKAG FTEPTPIQSQ GWPMAMKGRD LIGIAETGSG KTLSYLLPAI  60
   61 VHVNAQPMLA HGDGPIVLVL APTRELAVQI QQEASKFGSS SKIKTTCIYG GVPKGPQVRD 120
  121 LQKGVEIVIA TPGRLIDMME SNNTNLRRVT YLVLDEADRM LDMGFDPQIR KIVSHIRPDR 180
  181 QTLYWSATWP KEVEQLSKKF LYNPYKVIIG SSDLKANRAI RQIVDVISES QKYNKLVKLL 240
  241 EDIMDGSRIL VFLDTKKGCD QITRQLRMDG WPALSIHGDK SQAERDWVLS EFRSGKSPIM 300
  301 TATDVAARGL DVKDVKYVIN YDFPGSLEDY VHRIGRTGRA GAKGTAYTFF TVANARFAKE 360
  361 LTNILQEAGQ KVSPELASMG RSTAPPPPGL GGFRDRGSRR GWS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.30103
Match: 2i4iA
Description: No description for 2i4iA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle