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View Structure Prediction Details

Protein: COPT3_ARATH
Organism: Arabidopsis thaliana
Length: 151 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COPT3_ARATH.

Description E-value Query
Range
Subject
Range
gi|25408576, gi|... - gi|4895192|gb|AAD32779.1|AC007661_16 hypothetical protein [Arabidopsis thaliana], pir||G84798 hypoth...
130.0 [0..24] [145..24]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGMSGSSPA APAPSPSSFF QHRHRHGGMM HMTFFWGKTT EVLFDGWPGT SLKMYWVCLA  60
   61 VIFVISAFSE CLSRCGFMKS GPASLGGGLL QTAVYTVRAA LSYLVMLAVM SFNGGVFVAA 120
  121 MAGFGLGFMI FGSRAFRATS SNSHTEVQSH C

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 42.119186
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle