YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|13374879, gi|...
Organism: Arabidopsis thaliana
Length: 210 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13374879, gi|....

Description E-value Query
Range
Subject
Range
gi|7649373, gi|4... - gi|7649373|emb|CAB88990.1| putative protein [Arabidopsis thaliana], gi|50198946|gb|AAT70476.1| At3g4...
217.0 [0..1] [210..1]

Back

Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGRYCDQHN GYEERRMRMM MRRIAWACLG LIVAVAFVVF LVWAILHPHG PRFVLQDVTI  60
   61 NDFNVSQPNF LSSNLQVTVS SRNPNDKIGI FYDRLDIYVT YRNQEVTLAR LLPSTYQGHL 120
  121 EVTVWSPFLI GSAVPVAPYL SSALNEDLFA GLVLLNIKID GWVRWKVGSW VSGSYRLHVN 180
  181 CPAFITVTGK LTGTGPAIKY QLVQRCAVDV 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.82
Match: 1xo8A
Description: Solution structure of AT1g01470 from Arabidopsis Thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle