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View Structure Prediction Details

Protein: VP26A_ARATH
Organism: Arabidopsis thaliana
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VP26A_ARATH.

Description E-value Query
Range
Subject
Range
gi|66500087 - gi|66500087|ref|XP_396685.2| PREDICTED: similar to Vacuolar protein sorting 26 homolog (VPS26 protei...
305.0 [0..1] [300..1]

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Predicted Domain #1
Region A:
Residues: [1-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYLLGAFKP ACNISITFTD GKNRKQVPTK KDNGQIVMNP LFQSQETIAG KINIEPYQGK  60
   61 KVEHNGVKVE LLGQIEMYFD RGNFYDFTSL VREIDVPGEI YERKTYPFEF SSVEMPYETY 120
  121 NGVNVRLRYV LKVTVTRGYA GSIVEYQDFV VRNYVPLPPI NNSIKMEVGI EDCLHIEFEY 180
  181 NKSKYHLKDV ILGKIYFLLV RIKIKNMDLE IRRRESTGAG ANTHVETETL AKFELMDGAP 240
  241 VRGESIPVRV FLTPYDLTPT HKNINNKFSV KYYLNLVLVD EEDRRYFKQQ EITLYRLKEE 300
  301 TS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.522879
Match: 2fauA
Description: No description for 2fauA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle