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View Structure Prediction Details

Protein: PR1B1_ARATH
Organism: Arabidopsis thaliana
Length: 209 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PR1B1_ARATH.

Description E-value Query
Range
Subject
Range
gi|15450978, gi|... - gi|17978749|gb|AAL47368.1| putative protein [Arabidopsis thaliana], gi|15450978|gb|AAK96760.1| putat...
212.0 [0..1] [194..1]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPPTLPVT NQQAVQSQPP INTPAFRTFF SRLSTSIRDG LSQRRPWTEL IDRSSMARPE  60
   61 SLTDALSRIR KNLAYFKVNY VAIVSLVLAF SLFSHPLSLL VLIGLLGGWM FLYLFRPSDQ 120
  121 PLVVFGRTFS DRETLLALVL STIVVVFMTS VGSLLTSALM IGVAIVCVHG AFVVPDDLFL 180
  181 DEQEPANAGL LSFLGGSATS AAAAVSGRV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 78.30103
Match: PF03208.10
Description: No description for PF03208.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle