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View Structure Prediction Details

Protein: B3GT8_ARATH
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B3GT8_ARATH.

Description E-value Query
Range
Subject
Range
gi|21360399, gi|... - pir||A86186 hypothetical protein [imported] - Arabidopsis thaliana, gi|2388580|gb|AAB71461.1| Simil...
322.0 [0..6] [393..15]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAKAASGKA IIVLCLASFL AGSLFMSRTL SRSYIPEEED HHLTKHLSKH LEIQKDCDEH  60
   61 KRKLIESKSR DIIGE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [76-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSRTHQAVKS LERTMSTLEM ELAAARTSDR SSEFWSERSA KNQSRLQKVF AVIGINTAFS  60
   61 SKKRRDSVRQ TWMPTGEKLK KIEKEKGIVV RFVIGHSATP GGVLDKAIDE EDSEHKDFLR 120
  121 LKHIEGYHQL STKTRLYFST ATAMYDAEFY VKVDDDVHVN LGMLVTTLAR YQSRPRIYIG 180
  181 CMKSGPVLSQ KGVKYHEPEF WKFGEEGNKY FRHATGQIYA ISKDLATYIS TNQGILHRYA 240
  241 NEDVSLGAWM LGLEVEHVDE RSMCCGTPPD CQWKAQAGNV CAASFDWSCS GICKSVDRMA 300
  301 RVHRACAEGD TPLANFRFFV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.522879
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle