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View Structure Prediction Details

Protein: ANTL3_ARATH
Organism: Arabidopsis thaliana
Length: 427 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANTL3_ARATH.

Description E-value Query
Range
Subject
Range
gi|91084137 - gi|91084137|ref|XP_969912.1| PREDICTED: similar to CG8475-PA, isoform A [Tribolium castaneum]
202.0 [0..16] [387..2459]

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Predicted Domain #1
Region A:
Residues: [1-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYDQEAGSS SHSLPSGSSS HSLPPTEDTP LLGPRTLSSQ PKTFANVFIA IVGAGVLGLP  60
   61 YTFKKTGWLL GLLTLLFVSS LTFFCMMLLV HTRRKLESLS GFNSITSFGD LGESVCGPAG 120
  121 RLVVDVMLVL SQSGFCVSYL IFVATTMANL LSRGTEHILG LDAASIYLWG CFPFQLGLNS 180
  181 IPSLTHLAPL SIFADIVDVA ATLVVMVQDV FIFLKRRPPL RVFGGVSVFF YGLGVAVYAF 240
  241 EGIGMVLPLE LEAKYKDKFG RALGLAMGLI SIMYGAFGLL GYMAYGEETK DIITTNLGTG 300
  301 VVSTLVQLGL AINLFFTFPL MMQPVYEVVE RRLCSSRYSV WVRWATVLVV TLVALLVPNF 360
  361 ADFLSLVGSS VCVVLGFVLP SLFHLQAFKN ELSITRIVVD VLVFLIGVMI AITGTWTAVH 420
  421 EILTSKA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.34
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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