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View Structure Prediction Details

Protein: RH36_ARATH
Organism: Arabidopsis thaliana
Length: 491 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH36_ARATH.

Description E-value Query
Range
Subject
Range
gi|74210167 - gi|74210167|dbj|BAE21355.1| unnamed protein product [Mus musculus]
367.0 [0..3] [481..118]

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Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEPTPEEEG GITIMSKSRK NPKTVVNIQS QKLDSDQNTP QFEKFTNPNP SSDTTSATNF  60
   61 EGLGLAEWAV ETCKELGMRK PTPVQTHCVP KILAGRDVLG LAQTGSGKTA AFALPILHRL 120
  121 AEDPYGVFAL VVTPTRELAF QLAEQFKALG SCLNLRCSVI VGGMDMLTQT MSLVSRPHIV 180
  181 ITTPGRIKVL LENNPDVPPV FSRTKFLVLD EADRVLDVGF QDELRTIFQC LPKSRQTLLF 240
  241 SATMTSNLQA LLEHSSNKAY FYEAYEGLKT VDTLTQQFIF EDKDAKELYL VHILSQMEDK 300
  301 GIRSAMIFVS TCRTCQRLSL MLDELEVENI AMHSLNSQSM RLSALSKFKS GKVPILLATD 360
  361 VASRGLDIPT VDLVINYDIP RDPRDYVHRV GRTARAGRGG LAVSIITETD VKLIHKIEEE 420
  421 VGKKMEPYNK KVITDS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.69897
Match: 2db3A
Description: No description for 2db3A was found.

Predicted Domain #2
Region A:
Residues: [437-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEVTKVSKAK RVAMMKMLDN GFEDKVKDRR KLKRKTLADK GLLKKRGKRQ KSTEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1d9zA
Description: Nucleotide excision repair enzyme UvrB
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle