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View Structure Prediction Details

Protein: CRR24_ARATH
Organism: Arabidopsis thaliana
Length: 262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRR24_ARATH.

Description E-value Query
Range
Subject
Range
gi|51969740 - gi|51969740|dbj|BAD43562.1| putative protein [Arabidopsis thaliana]
322.0 [0..2] [262..10]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSSSVTKH LISASILAIV AMQLPSVHSV LSLNETNAYL HHICINGEGT FKSGSPYEKE  60
   61 IKQLIDFLSS FIKDYSFVHG VSGIGP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDINVKFQCR GDTLQAKCRS CLATAFSEIR SKCPNNKGRI IWYDNCHLDL SSIYTYGQID  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 12.958607
Match: PF01657.7
Description: No description for PF01657.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [147-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YKNNFYMYNA KDVRGDKKSF YKNMKAFLHK LKAKASSKEN KPYVKDYMYA AGRESLGTVK  60
   61 LYAMVQCTQD LSLKNCTVCL DWIMTKLPEC CNGKQGGRVL SPSCNFRYEL YPFVEN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 24.045757
Match: PF01657.7
Description: No description for PF01657.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle