YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PR1G2_ARATH
Organism: Arabidopsis thaliana
Length: 186 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PR1G2_ARATH.

Description E-value Query
Range
Subject
Range
gi|60834043 - gi|60834043|gb|AAX37076.1| Rab acceptor 1 [synthetic construct]
184.0 [0..10] [172..17]

Back

Predicted Domain #1
Region A:
Residues: [1-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPSPPPITY ISIPLPTNDV VSRSIHNLTT AISSHRPWSE LIFSGDFSLP ESFSSLLLRS  60
   61 KTNFNYFFVN YTIIVSTCAA FALITASPVA LIVVGAIIAL WLIFHFFRED PLILWSFQVG 120
  121 DRTVLLFLVL ASVWAIWFTN SAVNLAVGVS VGLLLCIIHA VFRNSDELFL EEDDAINGGL 180
  181 IGSNLR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 65.619789
Match: PF03208.10
Description: No description for PF03208.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle