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View Structure Prediction Details

Protein: ASE1_ARATH
Organism: Arabidopsis thaliana
Length: 566 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASE1_ARATH.

Description E-value Query
Range
Subject
Range
gi|92870676 - gi|92870676|gb|ABE79947.1| Purine/pyrimidine phosphoribosyl transferase [Medicago truncatula]
486.0 [0..1] [566..1]
gi|56718733 - gi|56718733|gb|AAW28080.1| chloroplast amidophosphoribosyltransferase [Arabidopsis thaliana]
484.0 [0..1] [566..1]
gi|37983539 - gi|37983539|gb|AAR06289.1| 5-phosphoribosyl-1-pyrophosphate amidotransferase [Nicotiana tabacum]
455.0 [0..82] [565..76]
gi|94268752, gi|... - gi|94268752|ref|ZP_01291273.1| Amidophosphoribosyl transferase [delta proteobacterium MLMS-1], gi|93...
448.0 [0..27] [544..38]
gi|78223146, gi|... - gi|78223146|ref|YP_384893.1| amidophosphoribosyltransferase [Geobacter metallireducens GS-15], gi|78...
446.0 [0..86] [534..5]
gi|152022867, gi... - gi|89200081|ref|ZP_01178837.1| Amidophosphoribosyl transferase [Bacillus cereus subsp. cytotoxis NVH...
444.0 [0..85] [540..6]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTSFSSS LSLITKPNNS SYTNQPLPLF PKPFLKPPHL SLLPSPLSSP PPSLIHGVSS  60
   61 YFSSPSPSED NSHTPFDYHN DEDDEKPRE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-566]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ECGVVGIYGD PEASRLCYLA LHALQHRGQE GAGIVTVSPE KVLQTITGVG LVSEVFNESK  60
   61 LDQLPGEFAI GHVRYSTAGA SMLKNVQPFV AGYRFGSIGV AHNGNLVNYK TLRAMLEENG 120
  121 SIFNTSSDTE VVLHLIAISK ARPFFMRIID ACEKLQGAYS MVFVTEDKLV AVRDPYGFRP 180
  181 LVMGRRSNGA VVFASETCAL DLIEATYERE VYPGEVLVVD KDGVKSQCLM PKFEPKQCIF 240
  241 EHIYFSLPNS IVFGRSVYES RHVFGEILAT ESPVECDVVI AVPDSGVVAA LGYAAKSGVP 300
  301 FQQGLIRSHY VGRTFIEPSQ KIRDFGVKLK LSPVRGVLEG KRVVVVDDSI VRGTTSSKIV 360
  361 RLLREAGAKE VHMRIASPPI VASCYYGVDT PSSEELISNR LSVEEINEFI GSDSLAFLSF 420
  421 DTLKKHLGKD SKSFCYACFT GDYPVKPTEV KVKRGGGDFI DDGLVGSFEN IEAGWVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 119.0
Match: 1ao0A
Description: Glutamine PRPP amidotransferase, C-terminal domain; Glutamine PRPP amidotransferase, N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle