YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: RH34_ARATH
Organism: Arabidopsis thaliana
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH34_ARATH.

Description E-value Query
Range
Subject
Range
RH20_ARATH - DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana GN=RH20 PE=2 SV=1
338.0 [0..1] [391..78]

Back

Predicted Domain #1
Region A:
Residues: [1-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGTLDEENL VFETTKGIKP IKSFDDMGMN DKVLRGVYDY GYKKPSEIQQ RALVPILKGR  60
   61 DVIAQAQSGT GKTSMIAISV CQIVNISSRK VQVLVLSPSR ELASQTEKTI QAIGAHTNIQ 120
  121 AHACIGGKSI GEDIKKLERG VHAVSGTPGR VYDMIKRGSL QTKAVKLLVL DESDEMLSKG 180
  181 LKDQIYDVYR ALPHDIQVCL ISATLPQEIL EMTEKFMTDP VRILVKPDEL TLEGIKQYYV 240
  241 DVDKEEWKFD TLCDLYGRLT INQAIIFCNT RQKVDWLTEK MRSSNFIVSS MHGDKRQKER 300
  301 DDIMNQFRSF KSRVLIASDV WARGIDVQTV SHVINYDIPN NPELYIHRIG RAGRFGREGV 360
  361 AINFVKSSDM KDLKDIERHY GTKIREMPAD LV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.154902
Match: 2j0qA
Description: No description for 2j0qA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle