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View Structure Prediction Details

Protein: CAMK6_ARATH
Organism: Arabidopsis thaliana
Length: 594 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAMK6_ARATH.

Description E-value Query
Range
Subject
Range
gi|125545976 - gi|125545976|gb|EAY92115.1| hypothetical protein OsI_13822 [Oryza sativa Indica Group]
gi|115455805, gi... - gi|50355719|gb|AAT75244.1| putative calcium-dependent protein kinase [Oryza sativa (japonica cultiva...
439.0 [0..1] [592..1]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHCYSRNIS TVDDDDEIPS ATAQLPHRSH QNHHQTSSSS SIPQSPATSE VNPYNISPFQ  60
   61 SPLPAGVAPS PARTPGRKFK WPFPPPSPAK PIMAALRRRR GTAPHPRDGP IPEDSEAGGS 120
  121 GGGIGERLDK NFG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.32
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [134-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FAKNFEGKYE LGREVGRGHF GHTCWAKAKK GKIKGQTVAV KIISKSKMTS ALSIEDVRRE  60
   61 VKLLKALSGH SHMVKFYDVF EDSDNVFVVM ELCEGGELLD SILARGGRYP EAEAKRILVQ 120
  121 ILSATAFFHL QGVVHRDLKP ENFLFTSKNE DAVLKVIDFG LSDYARFDQR LNDVVGSAYY 180
  181 VAPEVLHRSY STEADIWSIG VISYILLCGS RPFYGRTESA IFRCVLRANP NFDDLPWPSI 240
  241 SPIAKDFVKR LLNKDHRKRM TAAQALAHPW LRDENPGLLL DFSIYKLVKS YIR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.522879
Match: 2jc6A
Description: No description for 2jc6A was found.

Predicted Domain #3
Region A:
Residues: [427-594]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASPFRRAALK SLSKAIPEEE LVFLKAQFML LEPEDGGLHL HNFTTALTRY ATDAMIESRL  60
   61 PDILNMMQPL AHKKLDFEEF CAASVSVYQL EALEEWEQIA TVAFEHFESE GSRAISVQEL 120
  121 AEEMSLGPNA YPLLKDWIRS LDGKLNFLGY AKFLHGVTVR SSSSRPMR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.30103
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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