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View Structure Prediction Details

Protein: gi|9759075, gi|9...
Organism: Arabidopsis thaliana
Length: 378 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9759075, gi|9....

Description E-value Query
Range
Subject
Range
COMT1_POPTM - Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1
320.0 [0..10] [378..4]

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Predicted Domain #1
Region A:
Residues: [1-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANHLQVPLT KPDRVKEEQE VEEEARLLAR RLANAAASPM VLKAALELGV IDTITTVGGG  60
   61 DLWLSPSEIA LRLPTKPCNL EAPALLDRML RFLVSHSVLK CRTVIEENGQ TGKVERVYAA 120
  121 EPVCKYLLNK SDDVSGSFAS LFMLDLSDVF IKTWTHLEDV ILEGRDAFSS AHGMKLFEYI 180
  181 QADERFGKVF NRAMLESSTM VTEKVLKFYE GFKDVKTLVD VGGGLGNTLG LITSKYPHLI 240
  241 GINFDLAPVL ANAHSYPGVN HVAGDMFIKI PKGDAIFMKW ILHDWTDEQC VAILKNCWKS 300
  301 LEENGKLIIV EMVTPVEAKS GDICSNIVFG MDMTMLTQCS GGKERDLYEF ENLAYASGFS 360
  361 RCAIVCAVYP FSVIEIYK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.69897
Match: 1kywA
Description: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.723277178398499 bayes_pls_golite062009
transferase activity 0.64512166557639 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.54403439349476 bayes_pls_golite062009
methyltransferase activity 0.54389223881989 bayes_pls_golite062009
transcription regulator activity 0.4843036104266 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle