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View Structure Prediction Details

Protein: RGL2_ARATH
Organism: Arabidopsis thaliana
Length: 547 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RGL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|26451075 - gi|26451075|dbj|BAC42642.1| putative RGA1 [Arabidopsis thaliana]
749.0 [0..1] [547..1]

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Predicted Domain #1
Region A:
Residues: [1-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRGYGETWD PPPKPLPASR SGEGPSMADK KKADDDNNNS NMDDELLAVL GYKVRSSEMA  60
   61 EVAQKLEQLE MVLSNDDVGS TVLNDSVHYN PSDLSNWVES MLSELNNPAS SDLDTTRSCV 120
  121 DRSEYDLRAI PGLSAFPKEE EVFDEEASSK RIRLGSWCES SDESTRSVVL VDSQETGVRL 180
  181 VHALVACAEA IHQENLNLAD ALVKRVGTLA GSQAGAMGKV ATYFAQALAR RIYRDYTAET 240
  241 DVCAAVNPSF EEVLEMHFYE SCP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [264-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YLKFAHFTAN QAILEAVTTA RRVHVIDLGL NQGMQWPALM QALALRPGGP PSFRLTGIGP  60
   61 PQTENSDSLQ QLGWKLAQFA QNMGVEFEFK GLAAESLSDL EPEMFETRPE SETLVVNSVF 120
  121 E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [385-547]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHRLLARSGS IEKLLNTVKA IKPSIVTVVE QEANHNGIVF LDRFNEALHY YSSLFDSLED  60
   61 SYSLPSQDRV MSEVYLGRQI LNVVAAEGSD RVERHETAAQ WRIRMKSAGF DPIHLGSSAF 120
  121 KQASMLLSLY ATGDGYRVEE NDGCLMIGWQ TRPLITTSAW KLA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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