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View Structure Prediction Details

Protein: CCB12_ARATH
Organism: Arabidopsis thaliana
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCB12_ARATH.

Description E-value Query
Range
Subject
Range
gi|1360646, gi|2... - pir||S65734 mitosis-specific cyclin 1b - Arabidopsis thaliana, gi|1360646|gb|AAB02028.1| cyclin
408.0 [0..1] [445..1]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI  60
   61 TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP EAQRAVQKKN LVVKQQTKPV 120
  121 EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAAVEYVDDM YSFYKEVEKE SQPKMYMHIQ TEMNEKMRAI LIDWLLEVHI KFELNLETLY  60
   61 LTVNIIDRFL SVKAVPKREL QLVGISALLI ASKYEEIWPP QVNDLVYVTD NAYSSRQILV 120
  121 MEKAILGNLE WYLTVPTQYV FLVRFIKASM SDPEMENMVH FLAELGMMHY DTLTFCPSML 180
  181 AASAVYTARC SLNKSPAWTD TLQFHTGYTE SEIMDCSKLL AFLHSRCGES RLRAVYKKYS 240
  241 KAENGGVAMV SPAKSLLSAA ADWKKPVSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.69897
Match: 2jgzB
Description: No description for 2jgzB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle