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View Structure Prediction Details

Protein: IPT6_ARATH
Organism: Arabidopsis thaliana
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPT6_ARATH.

Description E-value Query
Range
Subject
Range
gi|89084567, gi|... - gi|89100692|ref|ZP_01173548.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Bacillus sp. NRRL...
248.0 [0..42] [311..11]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQLMTLLSP PLSHSSLLPT VTTKFGSPRL VTTCMGHAGR KNIKDKVVLI TGTTGTGKSR  60
   61 LSVDLATRFF PAEIINSDKM QIYKGFEIVT NLIPLHEQGG VPHHLLGQFH PQDGELTPAE 120
  121 FRSLATLSIS KLISSKKLPI VVGGSNSFNH ALLAERFDPD IDPFSPGSSL STICSDLRYK 180
  181 CCILWVDVLE PVLFQHLCNR VDQMIESGLV EQLAELYDPV VDSGRRLGVR KTIGVEEFDR 240
  241 YFRVYPKEMD KGIWDLARKA AYEETVKGMK ERTCRLVKKQ KEKIMKLIRG GWEIKRLDAT 300
  301 AAIMAELNQS TAKGEGKNGR EIWEKHIVDE SVEIVKKFLL EV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.69897
Match: 2qgnA
Description: No description for 2qgnA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle