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View Structure Prediction Details

Protein: RP44A_ARATH
Organism: Arabidopsis thaliana
Length: 933 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for RP44A_ARATH.

Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQSKVFNKK TRGGRIQKQV REVYLRDDIY CGAFSCKSCD SSAARLSSSK IIVVDTNVVL  60
   61 HQIDLLENKA IDTVVVLSVV LDEVKNRNRS VYNRIRLLCS NPARQFYVFS NHVHKDTYVQ 120
  121 AMEKESANDH NDRAIRVATL WYQKHLGDTS QVLLVTNDRE NKRKATEEGI SAETIEAYVK 180
  181 SLGQPELLDL LAQPTNEDIT MEDADDSRP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [210-933]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKRKLIYQEH KPMSEITAGL HRGIYHQGKL RVNRFNPYEA YVGSESIGEE IIIYGRSNMN  60
   61 RAFDGDIVAV ELLPRDQWQD EKALSIAEED DEEDDTVHLA PDNVDDAPRT SNLSHETSGD 120
  121 KNAAPVRPSG RVVGVIRRNW HSYCGSLEPM SLPAGSGGTA HALFVSKDRR IPKIRINTRQ 180
  181 LQNLLDMRIV VAVDSWDRQS RYPSGHYVRP IGKIGDKETE TEVVLIENDV DYSPFSSQVL 240
  241 ACLPPLPWSV SSEDVSNPVR QDLRHLLVFS VDPPGCKDID DALHCTSLPN GNFELGVHIA 300
  301 DVTNFVHPGT PLDDEASKRG TSVYLVERRI DMLPKPLTED ICSLRADVER LAFSVIWEMS 360
  361 PDAEIISTRF TKSIIKSSAA LSYIEAQARM DDSRLTDSLT TDLRNMNTLA KIMRQRRIDR 420
  421 GALTLASAEV KFDIDPENHD PLNIGMYQIL EANQMVEEFM LAANVSVAGQ ILKLFPSCSL 480
  481 LRRHPTPTRE MLEPLLRTAA AIGLTLDVSS SKALADSLDR AVGEDPYFNK LIRILATRCM 540
  541 TQAVYFCSGD LSPPEYHHYG LAAPLYTHFT SPIRRYADVF VHRLLAASLG IYKLPTVFQD 600
  601 RPQLTSVADN LNYRHRNAQM AGRASVELYV LIYFRTRPTD EEARVVKIRS NGFIVFVPKY 660
  661 GIEGPVYLTG KGEKGAGDWY VDEEKQKIVK MDGSLSYSVL QTVKIHMEVV EPQPNRPKLQ 720
  721 LTLL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 167.0
Match: 2vnuD
Description: No description for 2vnuD was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle