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View Structure Prediction Details

Protein: gi|18406795, gi|...
Organism: Arabidopsis thaliana
Length: 93 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18406795, gi|....

Description E-value Query
Range
Subject
Range
ZPR2_ARATH - Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana GN=ZPR2 PE=1 SV=1
102.0 [0..1] [86..1]
gi|52076162, gi|... - gi|52076162|dbj|BAD46675.1| unknown protein [Oryza sativa Japonica Group], gi|215766004|dbj|BAG98232...
48.0 [0..43] [84..60]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLSSSETFS DTPTRLVLYL KTQSHVRIPR LSRRRRMWRE EKKMEMINLK LYVENQNIIR  60
   61 ENEKLKKKAL LLHQENKTLF SLLQTKKLSS VHK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.29
Match: 1gd2E
Description: PAP1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle