YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: U78D1_ARATH
Organism: Arabidopsis thaliana
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for U78D1_ARATH.

Description E-value Query
Range
Subject
Range
gi|115334817, gi... - gi|92884230|gb|ABE87250.1| UDP-glucuronosyl/UDP-glucosyltransferase [Medicago truncatula], gi|115334...
328.0 [0..4] [451..1]

Back

Predicted Domain #1
Region A:
Residues: [1-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKFSEPIRD SHVAVLAFFP VGAHAGPLLA VTRRLAAASP STIFSFFNTA RSNASLFSSD  60
   61 HPENIKVHDV SDGVPEGTML GNPLEMVELF LEAAPRIFRS EIAAAEIEVG KKVTCMLTDA 120
  121 FFWFAADIAA ELNATWVAFW AGGANSLCAH LYTDLIRETI GLKDVSMEET LGFIPGMENY 180
  181 RVKDIPEEVV FEDLDSVFPK ALYQMSLALP RASAVFISSF EELEPTLNYN LRSKLKRFLN 240
  241 IAPLTLLSST SEKEMRDPHG CFAWMGKRSA ASVAYISFGT VMEPPPEELV AIAQGLESSK 300
  301 VPFVWSLKEK NMVHLPKGFL DRTREQGIVV PWAPQVELLK HEAMGVNVTH CGWNSVLESV 360
  361 SAGVPMIGRP ILADNRLNGR AVEVVWKVGV MMDNGVFTKE GFEKCLNDVF VHDDGKTMKA 420
  421 NAKKLKEKLQ EDFSMKGSSL ENFKILLDEI VKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.69897
Match: 2c1xA
Description: Title Witheld
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.12142599404571 bayes_pls_golite062009
transferase activity 1.04894606863363 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.929172049566779 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.18186445930239 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle