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View Structure Prediction Details

Protein: FK121_ARATH
Organism: Arabidopsis thaliana
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FK121_ARATH.

Description E-value Query
Range
Subject
Range
gi|109502831, gi... - gi|62661790|ref|XP_224434.3| PREDICTED: similar to kelch-like 1 [Rattus norvegicus], gi|109502831|re...
281.0 [0..16] [349..404]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPEKKRKK NQKSSPNPSL PEDLIVSILA RVSRSYYTNL SVVSKTFRSI LTSPELYKTR  60
   61 TLLGKPETFL YVCLRFPD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1fs2A
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [79-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EANPRWLILY RKPNQTLTKK KKKKEDSSVH LLAPIPILNS PTVEWSSLVA VGSYLYAITA  60
   61 DIKDSPCSNV WYLDCRTHTW LDSPRLRLAH INSDFNGRTY FPGSSEKPDS LNCVEVYNTN 120
  121 TQTWNPVPPQ KRKLKFGNME GKIYIPPCQE NHRKAVALNP KVLTWEAVGL GTNLDRGSFC 180
  181 MIGNIAYCYD PSGKFRWMNC NTAEGDWSRL EGLEGLPKFA RYSTVKLAEY GGKLVVLWDK 240
  241 YVAASGYKEK MIWCAEISLE KRNSEEIWGK VEWFDAVLTV PKSYKFVCAK SATV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.0
Match: 1x2jA
Description: Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle