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View Structure Prediction Details

Protein: SERC_ARATH
Organism: Arabidopsis thaliana
Length: 295 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SERC_ARATH.

Description E-value Query
Range
Subject
Range
gi|89150449, gi|... - gi|89201533|ref|ZP_01180272.1| ATPase, E1-E2 type:Copper ion-binding:Copper-translocating P-type ATP...
178.0 [0..1] [295..391]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALTTSRVV PVQVPCRKLS SLFANFSCLE LRRYPCRGLV SIMNHPKLLR PVTASVQPHE  60
   61 LSTLGHEGNI VPSKEILDLW RSVEAVCFDV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSTVCVDEGI DELAEFCGAG KAVAEWTARA MGGSVPFEEA LAARLSLFKP SLSKVEEYLD  60
   61 KRPPRLSPGI EELVKKLRAN NIDVYLISGG FRQMINPVAS ILGIPRENIF ANNLLFGNSG 120
  121 EFLGFDENEP TSRSGGKAKA VQQIRKGRLY KTMAMIGDGA TDLEARKPGG ADLFICYAGV 180
  181 QLREAVAANA DWLIFKFESL INSLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.221849
Match: 1nnlA
Description: Phosphoserine phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoserine phosphatase activity 2.609399110972 bayes_pls_golite062009
catalytic activity 1.55296860681783 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.117331448391929 bayes_pls_golite062009
hydrolase activity 0.01837003348146 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle